Basic Information
Locus ID:
gene-QYE76_021631
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 72222499 | 72227157 | - | gene-QYE76_021631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 117,084.21 Da | 43.48 | 74.89 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 894 | 1022 | 2.45438E-34 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 729 | 865 | 1.9E-21 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 907 | 1008 | 2.7E-11 | IPR001650 |
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 67 | 211 | 1.2E-23 | IPR025558 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 749 | 1030 | 8.9E-44 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 889 | 1051 | 4.6E-34 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 672 | 888 | 2.2E-43 | IPR027417 |
| SMART | SM00487 | ultradead3 | 701 | 895 | 4.2E-22 | IPR014001 |
| SMART | SM00490 | helicmild6 | 934 | 1009 | 0.0089 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 893 | 1052 | 14.104056 | IPR001650 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 713 | 881 | 17.016542 | IPR014001 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 827 | 835 | - | IPR000629 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 602 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 604 | - | - |
| Coils | Coil | Coil | 235 | 255 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.1 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_051194518.1 | ATP-dependent RNA helicase DRS1-like [Lolium perenne] | 0 |
| P35683 | Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0701100 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0Q3F7A0 | DUF4283 domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100844278 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology