Basic Information
Locus ID:
gene-QYE76_021605
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase-associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 71458313 | 71462276 | - | gene-QYE76_021605 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 103,931.59 Da | 56.30 | 57.54 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 215 | 254 | 2.2E-11 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 912 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 885 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 438 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051199707.1 | uncharacterized protein LOC127313195 [Lolium perenne] | 0 |
| TrEMBL | A0A8J5TKY2 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0014g46908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |