Basic Information
Locus ID:
gene-QYE76_021381
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 63671550 | 63673637 | - | gene-QYE76_021381 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 68,346.36 Da | 43.60 | 103.60 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 574 | 591 | 0.67 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 225 | 248 | 0.042 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 102 | 7.46E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 349 | 609 | 1.33E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 150 | 422 | 2.09E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 458 | 9.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 459 | 653 | 6.7E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 148 | 264 | 1.5E-23 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 383 | 408 | 0.0021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 569 | 593 | 5.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 516 | 541 | 0.34 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 277 | 302 | 17.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 620 | 645 | 42.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 409 | 434 | 130.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 463 | 488 | 30.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 251 | 276 | 1.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 489 | 514 | 0.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 543 | 568 | 0.047 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 357 | 382 | 1.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 225 | 250 | 3.9E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 199 | 224 | 0.032 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 170 | 198 | 300.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_047081199.1 | EIN3-binding F-box protein 1-like [Lolium rigidum] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | F2D0F8 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology