Basic Information
Locus ID:
gene-QYE76_021257
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
LysM domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 59766566 | 59768629 | + | gene-QYE76_021257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 72,323.15 Da | 44.39 | 88.97 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 206 | 249 | 6.51279E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 211 | 250 | 7.1E-6 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 661 | 2.0E-32 | IPR001245 |
| SUPERFAMILY | SSF54106 | LysM domain | 205 | 250 | 2.75E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 661 | 5.48E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 459 | 674 | 5.2E-50 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 198 | 258 | 3.8E-9 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 458 | 3.7E-10 | - |
| SMART | SM00257 | LysM_2 | 139 | 186 | 0.54 | IPR018392 |
| SMART | SM00257 | LysM_2 | 206 | 250 | 5.3E-4 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 670 | 28.894855 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 205 | 249 | 10.814066 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 282 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051194215.1 | protein LYK5 [Lolium perenne] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7QRI3 | Protein LYK5 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology