HalophFGD

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Basic Information
Locus ID: gene-QYE76_021241
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 58940848 58942464 - gene-QYE76_021241
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.77 60,439.97 Da 56.45 93.68 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 5 42 1.7E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 2 51 1.07E-9 IPR036047
SUPERFAMILY SSF52047 RNI-like 131 492 3.92E-6 -
Gene3D G3DSA:1.20.1280.50 - 1 45 1.8E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G12840.1 0
RefSeq XP_051197017.1 FBD-associated F-box protein At4g10400-like [Lolium perenne] 0
Swiss-Prot Q9LTV2 Putative FBD-associated F-box protein At3g12840 OS=Arabidopsis thaliana OX=3702 GN=At3g12840 PE=4 SV=1 0
TrEMBL A0A3B6PKK5 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_8AG0626110, gene-QOZ80_8BG0654320 ...
gene-QOZ80_8BG0654330
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.2HG0112200.1.CDS1 ...
HORVU.MOREX.r3.2HG0112290.1, HORVU.MOREX.r3.3HG0299600.1.CDS1
Poaceae Lolium multiflorum 5 gene-QYE76_021187, gene-QYE76_021241, gene-QYE76_038734 ...
gene-QYE76_038741, gene-QYE76_055709
Poaceae Oryza sativa 1 LOC_Os08g24370.1
Poaceae Puccinellia tenuiflora 5 Pt_Chr0305480, Pt_Chr0305481, Pt_Chr0305483, Pt_Chr0305500 ...
Pt_Chr0305504
Poaceae Sporobolus alterniflorus 3 Chr06G001210, Chr15G002520, Chr29G001410
Poaceae Thinopyrum elongatum 1 Tel2E01G230700
Poaceae Triticum dicoccoides 6 gene_TRIDC2AG012690, gene_TRIDC2AG012730 ...
gene_TRIDC2AG012740, gene_TRIDC2BG015580, gene_TRIDC6AG024860, gene_TRIDC7BG000560
Poaceae Triticum aestivum 7 TraesCS2D02G106100.1, TraesCS2D02G106500.1.cds1 ...
TraesCS3B02G411400.1.cds1, TraesCS3D02G372000.1.cds1, TraesCS6B02G200700.1.cds1, TraesCS7D02G100900.1.cds1, TraesCS7D02G101100.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.