Basic Information
Locus ID:
gene-QYE76_021008
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 52496898 | 52497833 | - | gene-QYE76_021008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 34,008.11 Da | 26.47 | 84.66 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 147 | 6.0097E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 169 | 278 | 3.5E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 11 | 154 | 1.18E-21 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 166 | 278 | 1.18E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 156 | 274 | 9.0E-21 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 12 | 152 | 1.0E-18 | IPR008974 |
| Gene3D | G3DSA:6.10.250.3030 | - | 275 | 309 | 1.2E-7 | - |
| SMART | SM00225 | BTB_4 | 173 | 279 | 8.5E-13 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 13 | 147 | 15.481598 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 173 | 241 | 11.791785 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_047079211.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium rigidum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SHU4 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0616170, gene-QOZ80_8BG0643670 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0703140.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_020918, gene-QYE76_021008 |
| Poaceae | Oryza coarctata | 1 | Oco15G001220 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g03480.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G535900 |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G211000.1.cds1, TraesCS7D02G307800.1.cds1 |