Basic Information
Locus ID:
gene-QYE76_020918
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 49534995 | 49536577 | + | gene-QYE76_020918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 37,259.06 Da | 27.14 | 85.00 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 178 | 2.57942E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 200 | 309 | 4.3E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 11 | 52 | 9.37E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 197 | 309 | 1.31E-17 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 82 | 185 | 1.48E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 75 | 183 | 5.1E-9 | IPR008974 |
| Gene3D | G3DSA:6.10.250.3030 | - | 306 | 340 | 1.3E-7 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 187 | 305 | 1.1E-20 | IPR011333 |
| SMART | SM00225 | BTB_4 | 204 | 310 | 8.5E-13 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 13 | 178 | 10.904657 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 204 | 272 | 11.791785 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_047079211.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium rigidum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SHU4 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0616170, gene-QOZ80_8BG0643670 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0703140.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_020918, gene-QYE76_021008 |
| Poaceae | Oryza coarctata | 1 | Oco15G001220 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g03480.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G535900 |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G211000.1.cds1, TraesCS7D02G307800.1.cds1 |