Basic Information
Locus ID:
gene-QYE76_020712
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 43587587 | 43597568 | + | gene-QYE76_020712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.56 | 59,095.76 Da | 44.92 | 63.18 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00098 | Zinc knuckle | 211 | 227 | 8.7E-6 | IPR001878 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 343 | 430 | 3.7E-26 | IPR013103 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 304 | 333 | 6.45E-5 | IPR036875 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 205 | 232 | 1.08E-6 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 198 | 331 | 4.4E-7 | - |
| SMART | SM00343 | c2hcfinal6 | 313 | 329 | 0.26 | IPR001878 |
| SMART | SM00343 | c2hcfinal6 | 211 | 227 | 0.0011 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 212 | 227 | 10.361479 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 311 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.2 | - | 0 |
| RefSeq | XP_051230619.1 | uncharacterized protein LOC127348732 [Lolium perenne] | 0 |
| P10978 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | Q43491 | DNA sequence with open reading frame OS=Hordeum vulgare OX=4513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030472 |
| Poaceae | Lolium multiflorum | 226 | gene-QYE76_000514, gene-QYE76_000718, gene-QYE76_000828 ... |