Basic Information
Locus ID:
gene-QYE76_020686
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 43139886 | 43141788 | + | gene-QYE76_020686 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 21,459.00 Da | 43.71 | 92.02 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 60 | 142 | 1.1E-15 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 49 | 146 | 1.01E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 51 | 152 | 4.1E-28 | - |
| SMART | SM00213 | ubq_7 | 58 | 142 | 1.2E-12 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 58 | 146 | 17.365089 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_051206212.1 | ubiquitin-60S ribosomal protein L40-like [Lolium perenne] | 0 |
| P0CH34 | Ubiquitin-ribosomal protein eL40z fusion protein OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BZS4 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_020686, gene-QYE76_068757, gene-QYE76_068758 ... |