Basic Information
Locus ID:
gene-QYE76_020651
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 42398059 | 42422846 | + | gene-QYE76_020651 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 250,557.63 Da | 47.06 | 85.72 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 1093 | 1190 | 1.88373E-12 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1603 | 1721 | 6.56449E-56 | - |
| Pfam | PF13963 | Transposase-associated domain | 70 | 143 | 1.1E-21 | IPR029480 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 2094 | 2156 | 3.5E-13 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 379 | 590 | 8.3E-85 | IPR004242 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 1573 | 1670 | 1.0E-33 | IPR041577 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 1835 | 1946 | 2.4E-34 | IPR025452 |
| Pfam | PF03732 | Retrotransposon gag protein | 793 | 883 | 2.5E-8 | IPR005162 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1359 | 1704 | 2.0E-96 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 1518 | 1611 | 1.9E-27 | IPR043128 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1074 | 1215 | 2.1E-17 | IPR021109 |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 1351 | 1439 | 1.9E-16 | - |
| Gene3D | G3DSA:3.30.70.270 | - | 1440 | 1508 | 1.7E-13 | IPR043128 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 31 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051185024.1 | uncharacterized protein LOC127299149 [Lolium perenne] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A8R7V0H1 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |