Basic Information
Locus ID:
gene-QYE76_020460
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37458872 | 37462335 | + | gene-QYE76_020460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 89,865.87 Da | 45.82 | 83.68 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 686 | 713 | 1.94156E-4 | - |
| CDD | cd00121 | MATH | 410 | 542 | 9.86427E-21 | IPR002083 |
| CDD | cd00121 | MATH | 58 | 167 | 1.69657E-5 | IPR002083 |
| Pfam | PF00917 | MATH domain | 416 | 539 | 5.2E-5 | IPR002083 |
| Pfam | PF03405 | Fatty acid desaturase | 731 | 800 | 3.1E-24 | IPR005067 |
| Pfam | PF00651 | BTB/POZ domain | 573 | 681 | 1.8E-14 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 209 | 308 | 2.2E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 210 | 308 | 4.45E-29 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 564 | 713 | 6.59E-18 | IPR011333 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 733 | 805 | 1.68E-14 | IPR009078 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 55 | 171 | 9.32E-10 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 408 | 546 | 1.06E-22 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 311 | 391 | 3.6E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 171 | 1.1E-6 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 407 | 545 | 4.6E-20 | IPR008974 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 689 | 804 | 6.4E-23 | IPR012348 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 559 | 684 | 2.7E-21 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 195 | 310 | 6.2E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 211 | 310 | 7.0E-26 | IPR000210 |
| SMART | SM00225 | BTB_4 | 583 | 685 | 2.0E-9 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 409 | 541 | 19.49601 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 211 | 278 | 18.616846 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 583 | 653 | 11.998606 | IPR000210 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047078700.1 | uncharacterized protein LOC124689177 [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | M8AIM1 | Speckle-type POZ protein-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0712650 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0219660.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 12 | gene-QYE76_000351, gene-QYE76_018036, gene-QYE76_020460 ... |
| Poaceae | Puccinellia tenuiflora | 8 | Pt_Chr0100491, Pt_Chr0106602, Pt_Chr0206622, Pt_Chr0206755 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G840100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG009110, gene_TRIDC3AG071980 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS3A02G009700.1.cds1, TraesCS3A02G076600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb418740_P001 |