Basic Information
Locus ID:
gene-QYE76_020352
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 34700875 | 34702738 | + | gene-QYE76_020352 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 46,689.90 Da | 44.79 | 91.48 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 251 | 381 | 2.58162E-60 | - |
| CDD | cd17939 | DEADc_EIF4A | 42 | 240 | 1.73857E-135 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 264 | 372 | 1.5E-28 | IPR001650 |
| Pfam | PF00270 | DEAD/DEAH box helicase | 63 | 224 | 3.3E-40 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 107 | 392 | 1.22E-74 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 28 | 246 | 9.2E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 247 | 411 | 5.9E-58 | IPR027417 |
| SMART | SM00490 | helicmild6 | 291 | 372 | 4.1E-31 | IPR001650 |
| SMART | SM00487 | ultradead3 | 57 | 254 | 4.8E-58 | IPR014001 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 38 | 66 | 10.920789 | IPR014014 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 69 | 239 | 29.314697 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 250 | 411 | 25.95005 | IPR001650 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 185 | 193 | - | IPR000629 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.1 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_047082449.1 | eukaryotic initiation factor 4A-like [Lolium rigidum] | 0 |
| P41378 | Eukaryotic initiation factor 4A OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Y2R8 | Eukaryotic initiation factor 4A-11 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology