Basic Information
Locus ID:
gene-QYE76_020185
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30302871 | 30309440 | - | gene-QYE76_020185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 77,003.96 Da | 47.39 | 85.83 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 123 | 4.314E-18 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 154 | 269 | 7.1E-15 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 138 | 269 | 5.89E-20 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 17 | 125 | 7.68E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 126 | 1.0E-14 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 128 | 287 | 5.2E-30 | IPR011333 |
| SMART | SM00225 | BTB_4 | 160 | 270 | 1.7E-14 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 15 | 122 | 17.194756 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 160 | 226 | 13.17748 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 481 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047079132.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PI28 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH02.3022, BH09.1174, CH01.3035 |
| Poaceae | Lolium multiflorum | 19 | gene-QYE76_001585, gene-QYE76_001690, gene-QYE76_005059 ... |
| Poaceae | Sporobolus alterniflorus | 8 | Chr02G026660, Chr03G003120, Chr07G005200, Chr09G014280 ... |