Basic Information
Locus ID:
gene-QYE76_020182
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 30251748 | 30252866 | - | gene-QYE76_020182 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 41,505.96 Da | 41.26 | 86.45 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 39 | 166 | 3.92306E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 199 | 303 | 2.3E-13 | IPR000210 |
| Pfam | PF00917 | MATH domain | 49 | 167 | 6.0E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 39 | 169 | 5.07E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 186 | 304 | 5.49E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 306 | 371 | 2.7E-16 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 38 | 169 | 3.4E-23 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 182 | 300 | 2.3E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 206 | 306 | 4.2E-13 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 38 | 165 | 19.035759 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 206 | 264 | 13.053388 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.1 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_047078770.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NLL0 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0556170.1.CDS1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_020182, gene-QYE76_020183, gene-QYE76_020189 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0201546, Pt_Chr0201547, Pt_Chr0201550, Pt_Chr0201587 |
| Poaceae | Thinopyrum elongatum | 6 | Tel6E01G236300, Tel6E01G236400, Tel6E01G236500 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG013620, gene_TRIDC6AG013660 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS6A02G105200.1.cds1, TraesCS6A02G105500.1.cds1 ... |