Basic Information
Locus ID:
gene-QYE76_020038
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transport protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 26288832 | 26293463 | + | gene-QYE76_020038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 43,925.60 Da | 45.87 | 86.33 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 17 | 386 | 1.08E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 152 | 387 | 1.2E-37 | IPR015943 |
| SMART | SM00320 | WD40_4 | 170 | 210 | 0.021 | IPR001680 |
| SMART | SM00320 | WD40_4 | 261 | 305 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 309 | 349 | 6.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 221 | 257 | 4.1 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 177 | 211 | 9.004632 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 197 | 211 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18830.2 | - | 0 |
| RefSeq | XP_047079107.1 | protein transport protein Sec31B-like [Lolium rigidum] | 0 |
| Q4P2B6 | Protein transport protein SEC31 OS=Mycosarcoma maydis OX=5270 GN=SEC31 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0E0G0P5 | WD_REPEATS_REGION domain-containing protein OS=Oryza nivara OX=4536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri15G06539 |
| Poaceae | Echinochloa crus-galli | 1 | CH03.4557 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_020038 |
| Poaceae | Oryza coarctata | 1 | Oco03G001780 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g03990.1 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0201384, Pt_Chr0201412, Pt_Chr0201414, Pt_Chr0305667 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19408 |