Basic Information
Locus ID:
gene-QYE76_020000
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 25187270 | 25188664 | + | gene-QYE76_020000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 52,301.79 Da | 52.49 | 79.01 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 29 | 171 | 3.09216E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 220 | 294 | 5.1E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 208 | 395 | 1.41E-25 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 177 | 3.76E-26 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 175 | 3.6E-22 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 198 | 430 | 2.4E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 228 | 398 | 6.7E-15 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 228 | 297 | 17.375925 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 171 | 17.143616 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 200 | - | - |
| Coils | Coil | Coil | 327 | 369 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_047079100.1 | BTB/POZ and MATH domain-containing protein 3-like [Lolium rigidum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6QCF1 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0551320.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_013823, gene-QYE76_019885, gene-QYE76_020000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201211 |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G082200.1.cds1, TraesCS6B02G109200.1.cds1 ... |