Basic Information
Locus ID:
gene-QYE76_019993
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 25006008 | 25009715 | + | gene-QYE76_019993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 102,982.38 Da | 45.06 | 66.31 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 196 | 275 | 4.3E-9 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 397 | 490 | 8.6E-25 | IPR018289 |
| Pfam | PF04434 | SWIM zinc finger | 685 | 716 | 1.3E-4 | IPR007527 |
| Gene3D | G3DSA:4.10.60.10 | - | 845 | 921 | 1.1E-5 | - |
| SMART | SM00343 | c2hcfinal6 | 871 | 887 | 3.8 | IPR001878 |
| SMART | SM00343 | c2hcfinal6 | 900 | 916 | 0.017 | IPR001878 |
| SMART | SM00575 | 26again6 | 692 | 719 | 1.9E-6 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 681 | 717 | 9.643522 | IPR007527 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 901 | 915 | 8.531888 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 856 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_051187493.1 | protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Lolium perenne] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7U998 | SWIM-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology