Basic Information
Locus ID:
gene-QYE76_019885
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 22717010 | 22718152 | - | gene-QYE76_019885 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 42,012.17 Da | 36.92 | 83.21 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 150 | 5.12574E-24 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 176 | 254 | 8.5E-14 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 313 | 1.81E-22 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 155 | 1.46E-28 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 154 | 9.4E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 315 | 9.7E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 316 | 380 | 8.5E-9 | - |
| SMART | SM00225 | BTB_4 | 185 | 315 | 3.9E-16 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 16 | 150 | 14.663374 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 185 | 251 | 15.742047 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21010.1 | BTB-POZ and MATH domain 5. | 0 |
| RefSeq | XP_051197296.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q1EBV6 | BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NL26 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0551320.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_013823, gene-QYE76_019885, gene-QYE76_020000 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201211 |
| Poaceae | Triticum aestivum | 5 | TraesCS6A02G082200.1.cds1, TraesCS6B02G109200.1.cds1 ... |