HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_019594
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 15121540 15122784 + gene-QYE76_019594
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.19 46,562.11 Da 56.04 97.46 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 14 68 4.84E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 10 95 1.7E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044957582.1 uncharacterized protein LOC123408571 [Hordeum vulgare subsp. vulgare] 0
TrEMBL A0A3B6PW12 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 22 AH01.1249, AH01.1251, AH01.1252, AH01.2719, AH01.2720 ...
BH01.1467, BH01.1473, BH01.1474, BH01.3052, BH01.3053, BH04.387, BH05.659, CH01.3270, CH01.3274, CH01.3275, CH04.394, CH06.2652, CH06.2653, CH06.2654, CH06.2657, CH06.2658, CH07.3455
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2AG0118890, gene-QOZ80_2BG0164750 ...
gene-QOZ80_3AG0224390, gene-QOZ80_3AG0224400, gene-QOZ80_3BG0254470, gene-QOZ80_3BG0269390, gene-QOZ80_3BG0269400
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.7HG0751830.1.CDS1 ...
HORVU.MOREX.r3.7HG0752280.1.CDS1
Poaceae Lolium multiflorum 22 gene-QYE76_001111, gene-QYE76_001112, gene-QYE76_001114 ...
gene-QYE76_005542, gene-QYE76_013546, gene-QYE76_014144, gene-QYE76_016710, gene-QYE76_019279, gene-QYE76_019401, gene-QYE76_019593, gene-QYE76_019594, gene-QYE76_019614, gene-QYE76_019615, gene-QYE76_028882, gene-QYE76_049053, gene-QYE76_057230, gene-QYE76_057249, gene-QYE76_057958, gene-QYE76_057981, gene-QYE76_061028, gene-QYE76_062578, gene-QYE76_065348
Poaceae Paspalum vaginatum 11 gene-BS78_01G071300, gene-BS78_01G145300, gene-BS78_K058100 ...
gene-BS78_05G052500, gene-BS78_05G063600, gene-BS78_05G063700, gene-BS78_05G064100, gene-BS78_09G062900, gene-BS78_K058600, gene-BS78_K209900, gene-BS78_K253200
Poaceae Puccinellia tenuiflora 10 Pt_Chr0100012, Pt_Chr0100530, Pt_Chr0207346, Pt_Chr0500031 ...
Pt_Chr0500032, Pt_Chr0500039, Pt_Chr0500197, Pt_Chr0704815, Pt_Chr0704816, Pt_Chr0704895
Poaceae Sporobolus alterniflorus 1 Chr12G027540
Poaceae Triticum aestivum 7 TraesCS4A02G249900.1.cds1, TraesCS4B02G064800.1.cds1 ...
TraesCS4D02G063600.1.cds1, TraesCS6A02G011000.1.cds1, TraesCS6B02G468100.1.cds1, TraesCS7B02G497900.1.cds1, TraesCS7D02G545300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.