Basic Information
Locus ID:
gene-QYE76_019585
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 14934278 | 14937474 | - | gene-QYE76_019585 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 71,484.79 Da | 44.07 | 79.25 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 461 | 545 | 2.1E-21 | IPR026960 |
| Pfam | PF00646 | F-box domain | 15 | 54 | 4.7E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 56 | 4.32E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 59 | 2.4E-9 | - |
| SMART | SM00256 | fbox_2 | 18 | 58 | 2.8E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 132 | 377 | 4.3E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 61 | 13.127202 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50220.1 | F-box family protein. | 0 |
| RefSeq | XP_051197364.1 | F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Lolium perenne] | 0 |
| Q9FGS3 | Putative F-box protein At5g50220 OS=Arabidopsis thaliana OX=3702 GN=At5g50220 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6NK02 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH09.43, CH02.943 |
| Poaceae | Lolium multiflorum | 18 | gene-QYE76_000604, gene-QYE76_000934, gene-QYE76_008470 ... |
| Poaceae | Oryza coarctata | 1 | Oco13G011900 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29350.1 |
| Poaceae | Paspalum vaginatum | 12 | gene-BS78_01G123800, gene-BS78_02G063400, gene-BS78_K225200 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0503714 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G029590, Chr06G006790, Chr07G015220, Chr25G003250 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G423000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG041210, gene_TRIDC6BG030410 ... |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G451200.1.cds1, TraesCS7B02G453300.1.cds1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-22972, nbis-gene-39044 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g15460 |