Basic Information
Locus ID:
gene-QYE76_019413
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
A domain family that is part of the cupin metalloenzyme superfamily.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 10257709 | 10269822 | - | gene-QYE76_019413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 195,661.20 Da | 63.58 | 57.21 | -1.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02373 | JmjC domain, hydroxylase | 1083 | 1179 | 5.4E-13 | IPR003347 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 708 | 1222 | 7.42E-35 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 1019 | 1205 | 7.1E-69 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 696 | 933 | 1.1E-82 | - |
| SMART | SM00558 | cupin_9 | 810 | 1196 | 2.4E-70 | IPR003347 |
| ProSiteProfiles | PS51184 | JmjC domain profile. | 829 | 1196 | 25.299812 | IPR003347 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 382 | 433 | 8.742016 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1423 | 1458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1588 | 1643 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 985 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 966 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1230 | 1696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1465 | 1522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 986 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1544 | 1581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1728 | 1758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1230 | 1252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1326 | 1412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1656 | 1696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 250 | - | - |
| Coils | Coil | Coil | 297 | 317 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00990.1 | Transcription factor jumonji (jmjC) domain-containing protein. | 0 |
| RefSeq | XP_051195770.1 | lysine-specific demethylase JMJ25-like isoform X6 [Lolium perenne] | 0 |
| Q8VYB9 | Lysine-specific demethylase JMJ27 OS=Arabidopsis thaliana OX=3702 GN=JMJ27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453MSK2 | JmjC domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology