Basic Information
Locus ID:
gene-QYE76_019357
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8537080 | 8539589 | + | gene-QYE76_019357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 78,339.20 Da | 38.85 | 89.82 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 339 | 379 | 2.06186E-7 | - |
| Pfam | PF00069 | Protein kinase domain | 449 | 709 | 1.0E-43 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 67 | 1.9E-9 | IPR025287 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 290 | 380 | 1.24E-5 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 447 | 715 | 8.77E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 520 | 8.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 521 | 719 | 2.1E-51 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 296 | 380 | 1.0E-8 | - |
| SMART | SM00181 | egf_5 | 342 | 380 | 0.014 | IPR000742 |
| SMART | SM00181 | egf_5 | 289 | 338 | 100.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 446 | 713 | 1.9E-27 | IPR000719 |
| SMART | SM00179 | egfca_6 | 339 | 380 | 3.6E-9 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 713 | 36.159733 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 339 | 380 | 11.609928 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 339 | 366 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 566 | 578 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 452 | 474 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 357 | 368 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_047076109.1 | wall-associated receptor kinase 4-like [Lolium rigidum] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6YPF0 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology