Basic Information
Locus ID:
gene-QYE76_019348
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8317833 | 8319774 | - | gene-QYE76_019348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 53,323.05 Da | 34.76 | 89.42 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 134 | 170 | 1.59516E-6 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 220 | 474 | 8.2E-37 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 133 | 171 | 9.77E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 219 | 478 | 2.6E-57 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 91 | 176 | 1.3E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 208 | 283 | 2.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 483 | 1.9E-46 | - |
| SMART | SM00181 | egf_5 | 137 | 177 | 0.0048 | IPR000742 |
| SMART | SM00181 | egf_5 | 97 | 133 | 47.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 134 | 177 | 3.9E-8 | IPR001881 |
| SMART | SM00220 | serkin_6 | 214 | 476 | 6.9E-13 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 134 | 172 | 8.863358 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 209 | 476 | 29.672226 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 134 | 160 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 151 | 162 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 329 | 341 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_047078944.1 | wall-associated receptor kinase 2-like [Lolium rigidum] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | F2DK44 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology