Basic Information
Locus ID:
gene-QYE76_019121
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2075525 | 2087721 | + | gene-QYE76_019121 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 89,688.71 Da | 39.48 | 73.17 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00098 | Zinc knuckle | 248 | 263 | 4.5E-4 | IPR001878 |
| Pfam | PF03078 | ATHILA ORF-1 family | 445 | 603 | 8.7E-9 | IPR004312 |
| Pfam | PF14223 | gag-polypeptide of LTR copia-type | 67 | 197 | 7.3E-16 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 237 | 267 | 7.15E-8 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 239 | 285 | 5.8E-7 | - |
| SMART | SM00343 | c2hcfinal6 | 247 | 263 | 0.0048 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 248 | 263 | 9.059338 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 232 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051192320.1 | uncharacterized protein LOC127305832 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A453I8F0 | CCHC-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 272 | gene-QYE76_000070, gene-QYE76_000854, gene-QYE76_001188 ... |