Basic Information
Locus ID:
gene-QYE76_019075
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Transposase family tnp2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 481791 | 494730 | + | gene-QYE76_019075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 101,942.63 Da | 43.70 | 70.97 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 218 | 325 | 3.8E-53 | IPR004242 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 481 | 520 | 2.97E-6 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 467 | 524 | 4.2E-7 | - |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 488 | 501 | 8.976924 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 881 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 682 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051199363.1 | uncharacterized protein LOC127312853 [Lolium perenne] | 0 |
| TrEMBL | A0A8R7QJN3 | Transpos_assoc domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH01.2693, CH05.4449 |
| Poaceae | Lolium multiflorum | 24 | gene-QYE76_004977, gene-QYE76_006303, gene-QYE76_006527 ... |