Basic Information
Locus ID:
gene-QYE76_018813
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_383 | 43381 | 44337 | - | gene-QYE76_018813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 35,197.75 Da | 47.19 | 80.25 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 38 | 95 | 1.36692E-11 | - |
| Pfam | PF00240 | Ubiquitin family | 101 | 175 | 1.8E-9 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 180 | 230 | 8.3E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 37 | 95 | 1.2E-11 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 97 | 178 | 1.15E-12 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 36 | 98 | 3.91E-13 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 183 | 233 | 2.3E-6 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 180 | 8.1E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 181 | 235 | 1.0E-7 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 97 | 1.6E-15 | - |
| SMART | SM00213 | ubq_7 | 99 | 176 | 5.8E-4 | IPR000626 |
| SMART | SM00213 | ubq_7 | 15 | 97 | 4.9E-6 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 99 | 180 | 13.423744 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 171 | 233 | 11.202653 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 15 | 95 | 14.948022 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 55 | 75 | 3.4E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 34 | 54 | 3.4E-5 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09790.1 | ubiquitin 8. encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. | 0 |
| RefSeq | XP_051201449.1 | polyubiquitin 11-like [Lolium perenne] | 0 |
| P42739 | Polyubiquitin (Fragment) OS=Acetabularia peniculus OX=35862 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8J4GBA3 | Polyubiquitin OS=Volvox reticuliferus OX=1737510 GN=Vretifemale_6369 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_018813, gene-QYE76_036770, gene-QYE76_036774 ... |