Basic Information
Locus ID:
gene-QYE76_018800
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_698 | 96892 | 98007 | - | gene-QYE76_018800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 41,451.61 Da | 39.06 | 76.42 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 27 | 156 | 9.58304E-28 | IPR002083 |
| Pfam | PF00917 | MATH domain | 42 | 155 | 2.6E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 180 | 296 | 5.0E-22 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 170 | 297 | 1.1E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 164 | 5.23E-35 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 297 | 371 | 7.3E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 166 | 292 | 1.3E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 161 | 9.4E-30 | IPR008974 |
| SMART | SM00061 | math_3 | 32 | 139 | 2.1E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 188 | 297 | 1.1E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 188 | 250 | 17.21047 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 156 | 18.882341 | IPR002083 |
| Coils | Coil | Coil | 353 | 371 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_047058590.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | M0XBY4 | BTB domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.1925 |
| Poaceae | Hordeum vulgare | 7 | HORVU.MOREX.r3.1HG0084480.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 17 | gene-QYE76_018116, gene-QYE76_018795, gene-QYE76_018798 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29410.1 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0108068, Pt_Chr0202979, Pt_Chr0203631, Pt_Chr0206738 ... |
| Poaceae | Thinopyrum elongatum | 15 | Tel1E01G617200, Tel1E01G617400, Tel3E01G612800 ... |
| Poaceae | Triticum dicoccoides | 14 | gene_TRIDC1AG055610, gene_TRIDC1AG055620 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G378700.1.cds1, TraesCS1A02G378800.1.cds1 ... |