halophFGD

Basic Information

Locus ID: gene-QYE76_018506

Species & Taxonomic ID: Lolium multiflorum & 4521

Genome Assembly: GCA_030979885.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
unplaced_1329	38885	39877	-	gene-QYE76_018506

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.00	37,080.15 Da	43.30	78.58	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00651	BTB/POZ domain	151	261	4.7E-23	IPR000210
SUPERFAMILY	SSF54695	POZ domain	136	263	8.83E-30	IPR011333
Gene3D	G3DSA:1.25.40.420	-	265	326	4.3E-13	-
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	134	259	3.8E-33	IPR011333
SMART	SM00225	BTB_4	158	265	3.1E-24	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	158	226	17.500017	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G06190.1	BTB-POZ and MATH domain 2.
RefSeq	XP_047045060.1	BTB/POZ and MATH domain-containing protein 1-like [Lolium rigidum]
Swiss-Prot	Q9M8J9	BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1
TrEMBL	A0A3B6SDC1	BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0682400.1
Poaceae	Lolium multiflorum	4	gene-QYE76_018506, gene-QYE76_030112, gene-QYE76_030117 ... gene-QYE76_030120
Poaceae	Triticum aestivum	1	TraesCS7B02G151100.1.cds1