Basic Information
Locus ID:
gene-QYE76_018116
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Endonuclease/Exonuclease/phosphatase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_32 | 102 | 776 | - | gene-QYE76_018116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 24,913.78 Da | 38.49 | 73.93 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 41 | 172 | 8.99197E-29 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 185 | 224 | 4.39E-6 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 40 | 178 | 7.68E-33 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 41 | 175 | 3.5E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 186 | 224 | 9.1E-7 | IPR011333 |
| SMART | SM00061 | math_3 | 45 | 155 | 3.7E-7 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 40 | 172 | 18.217535 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051228335.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 0 |
| TrEMBL | A0A3B6KRC6 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH01.1925 |
| Poaceae | Hordeum vulgare | 7 | HORVU.MOREX.r3.1HG0084480.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 17 | gene-QYE76_018116, gene-QYE76_018795, gene-QYE76_018798 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g29410.1 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0108068, Pt_Chr0202979, Pt_Chr0203631, Pt_Chr0206738 ... |
| Poaceae | Thinopyrum elongatum | 15 | Tel1E01G617200, Tel1E01G617400, Tel3E01G612800 ... |
| Poaceae | Triticum dicoccoides | 14 | gene_TRIDC1AG055610, gene_TRIDC1AG055620 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G378700.1.cds1, TraesCS1A02G378800.1.cds1 ... |