HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_017898
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: Plant mobile domain
Maps and Mapping Data
Chromosome Start End Strand ID
unplaced_83 57154 62811 - gene-QYE76_017898
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.63 115,024.46 Da 53.43 60.26 -0.71
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 331 677 1.3E-50 IPR019557
Pfam PF03108 MuDR family transposase 169 232 4.0E-9 IPR004332
MobiDBLite mobidb-lite consensus disorder prediction 969 991 - -
MobiDBLite mobidb-lite consensus disorder prediction 105 144 - -
MobiDBLite mobidb-lite consensus disorder prediction 812 898 - -
MobiDBLite mobidb-lite consensus disorder prediction 118 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 846 863 - -
MobiDBLite mobidb-lite consensus disorder prediction 37 82 - -
MobiDBLite mobidb-lite consensus disorder prediction 818 832 - -
MobiDBLite mobidb-lite consensus disorder prediction 969 1022 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT1G48120.1 hydrolases;protein serine/threonine phosphatases. 0
RefSeq XP_051203757.1 serine/threonine-protein phosphatase 7 long form homolog [Lolium perenne] 0
Swiss-Prot Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 0
TrEMBL A0A3B6FHV2 PMD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 40 gene-QYE76_003106, gene-QYE76_004905, gene-QYE76_007129 ...
gene-QYE76_007459, gene-QYE76_007460, gene-QYE76_007678, gene-QYE76_008699, gene-QYE76_009652, gene-QYE76_010827, gene-QYE76_011172, gene-QYE76_016027, gene-QYE76_017898, gene-QYE76_024787, gene-QYE76_026183, gene-QYE76_031125, gene-QYE76_031920, gene-QYE76_031925, gene-QYE76_032983, gene-QYE76_034251, gene-QYE76_035075, gene-QYE76_036400, gene-QYE76_037581, gene-QYE76_037987, gene-QYE76_037998, gene-QYE76_037999, gene-QYE76_040991, gene-QYE76_041373, gene-QYE76_041718, gene-QYE76_045280, gene-QYE76_047443, gene-QYE76_049160, gene-QYE76_051154, gene-QYE76_054532, gene-QYE76_058190, gene-QYE76_059907, gene-QYE76_060651, gene-QYE76_062629, gene-QYE76_067714, gene-QYE76_069777, gene-QYE76_071208
Poaceae Oryza coarctata 1 Oco04G018420
Poaceae Triticum dicoccoides 1 gene_TRIDC5BG047900
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.