Basic Information
Locus ID:
gene-QYE76_017737
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_205 | 158962 | 173825 | + | gene-QYE76_017737 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 194,100.41 Da | 43.17 | 101.06 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 564 | 606 | 6.5E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 621 | 655 | 2.3E-6 | IPR025875 |
| Pfam | PF00931 | NB-ARC domain | 164 | 388 | 2.0E-29 | IPR002182 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1377 | 1553 | 1.9E-21 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 809 | 1146 | 9.18E-14 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 497 | 844 | 6.91E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1333 | 1626 | 7.4E-42 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 157 | 425 | 3.23E-47 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 5 | 121 | 4.5E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 957 | 1150 | 1.1E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 141 | 318 | 4.4E-25 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1319 | 1423 | 3.2E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 543 | 920 | 2.6E-71 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1424 | 1643 | 2.2E-36 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 406 | 510 | 3.5E-8 | IPR036388 |
| SMART | SM00369 | LRR_typ_2 | 690 | 713 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 619 | 642 | 1.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 573 | 596 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 762 | 785 | 400.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 621 | 642 | 7.249913 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1349 | 1630 | 22.916174 | IPR000719 |
| PRINTS | PR00364 | Disease resistance protein signature | 265 | 279 | 2.5E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 360 | 374 | 2.5E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 688 | 704 | 2.5E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 181 | 196 | 2.5E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1657 | 1713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1680 | 1713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1657 | 1679 | - | - |
| Coils | Coil | Coil | 109 | 129 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G11520.1 | calmodulin-binding receptor-like cytoplasmic kinase 3. high overall homology to CRCK1 | 0 |
| RefSeq | XP_047047466.1 | putative disease resistance protein RGA1 isoform X2 [Lolium rigidum] | 0 |
| Q9ASQ5 | Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRCK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LLJ1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1775, CH03.1930 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6BG0485990 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0473950.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_004556, gene-QYE76_017737 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g15850.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_K051400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0702607, Pt_Chr0702633 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G312800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG030020, gene_TRIDC5BG031660 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G184900.1, TraesCS5B02G182900.3 ... |
| Poaceae | Zea mays | 1 | Zm00001eb310060_P001 |