Basic Information
Locus ID:
gene-QYE76_017620
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Ribosome inactivating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_571 | 87293 | 92405 | - | gene-QYE76_017620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 18,703.20 Da | 27.60 | 90.00 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 47 | 169 | 2.0E-23 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 45 | 167 | 1.7E-18 | IPR036041 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 1 | 29 | 1.63E-5 | IPR015300 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 40 | 171 | 3.6E-30 | IPR016138 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 1 | 44 | 9.361225 | IPR003340 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 161 | 171 | 1.3E-6 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 48 | 61 | 1.3E-6 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 101 | 116 | 1.3E-6 | IPR017989 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051201646.1 | protein synthesis inhibitor II-like [Lolium perenne] | 0 |
| P25891 | Ribosome-inactivating protein 3 OS=Zea mays OX=4577 GN=CRIP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RPU4 | rRNA N-glycosylase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology