Basic Information
Locus ID:
gene-QYE76_017524
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_503 | 126010 | 127449 | - | gene-QYE76_017524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 15,951.39 Da | 51.56 | 82.52 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12906 | RING-variant domain | 22 | 77 | 3.0E-8 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 19 | 80 | 4.36E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 12 | 87 | 4.3E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 21 | 78 | 1.2E-11 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 14 | 84 | 16.883709 | IPR011016 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37950.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_051226863.1 | uncharacterized protein LOC127344597 isoform X1 [Lolium perenne] | 0 |
| TrEMBL | A0A077RUU1 | RING-CH-type domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF073300170CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology