Basic Information
Locus ID:
gene-QYE76_017484
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ubiquitin-dependent protein catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_13 | 92612 | 93774 | - | gene-QYE76_017484 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 33,513.20 Da | 41.85 | 78.79 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 201 | 310 | 3.0741E-29 | IPR033734 |
| CDD | cd16571 | RING-HC_SIAHs | 39 | 78 | 1.25912E-10 | - |
| Pfam | PF01419 | Jacalin-like lectin domain | 240 | 310 | 5.1E-12 | IPR001229 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 96 | 127 | 6.54E-7 | - |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 179 | 309 | 3.4E-26 | IPR036404 |
| SUPERFAMILY | SSF57850 | RING/U-box | 35 | 80 | 8.03E-5 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 167 | 311 | 1.8E-32 | IPR036404 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 96 | 5.8E-6 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 141 | 2.8E-7 | IPR013083 |
| SMART | SM00915 | Jacalin_2 | 190 | 311 | 2.5E-6 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 179 | 311 | 25.725086 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37890.1 | Protein with RING/U-box and TRAF-like domains. | 0 |
| RefSeq | XP_044352714.1 | jacalin-related lectin 3-like [Triticum aestivum] | 0 |
| Q9FKD7 | E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1 | 0 | |
| TrEMBL | M8B232 | Horcolin OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology