Basic Information
Locus ID:
gene-QYE76_017221
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ABC transporter C family member 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_1142 | 34346 | 39987 | - | gene-QYE76_017221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 164,872.11 Da | 36.73 | 104.45 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03244 | ABCC_MRP_domain2 | 1263 | 1483 | 1.33756E-118 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 638 | 838 | 3.54981E-109 | - |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 946 | 1240 | 4.46194E-84 | IPR044726 |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 325 | 612 | 3.32018E-92 | IPR044746 |
| Pfam | PF00664 | ABC transporter transmembrane region | 328 | 590 | 6.4E-19 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 949 | 1192 | 2.1E-28 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1282 | 1430 | 8.9E-28 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 656 | 790 | 3.5E-20 | IPR003439 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1254 | 1497 | 4.74E-64 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 635 | 859 | 1.02E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 946 | 1247 | 1.96E-50 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 314 | 620 | 3.27E-29 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 303 | 620 | 2.0E-46 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 907 | 1246 | 9.2E-63 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1250 | 1501 | 3.0E-75 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 627 | 868 | 9.1E-75 | IPR027417 |
| SMART | SM00382 | AAA_5 | 665 | 838 | 1.9E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1291 | 1476 | 6.9E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1265 | 1499 | 16.226631 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 638 | 861 | 23.109348 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 948 | 1228 | 35.158787 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 324 | 604 | 26.971359 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 763 | 777 | - | IPR017871 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13080.1 | multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. | 0 |
| RefSeq | XP_047061267.1 | ABC transporter C family member 3-like [Lolium rigidum] | 0 |
| Q9LK64 | ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EEK4 | ABC transporter C family member 3 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology