Basic Information
Locus ID:
gene-QYE76_017069
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Filamin/ABP280 repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_312 | 1577 | 15679 | - | gene-QYE76_017069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 183,128.41 Da | 43.18 | 87.86 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 5 | 130 | 5.1E-29 | IPR001220 |
| Pfam | PF17963 | Bacterial Ig domain | 1141 | 1222 | 1.9E-10 | - |
| Pfam | PF00630 | Filamin/ABP280 repeat | 901 | 1021 | 4.5E-9 | IPR017868 |
| Pfam | PF00069 | Protein kinase domain | 213 | 500 | 1.6E-38 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 5 | 277 | 1.11E-31 | IPR013320 |
| SUPERFAMILY | SSF81296 | E set domains | 1098 | 1151 | 5.74E-6 | IPR014756 |
| SUPERFAMILY | SSF81296 | E set domains | 902 | 1034 | 7.01E-7 | IPR014756 |
| SUPERFAMILY | SSF81296 | E set domains | 680 | 793 | 2.6E-5 | IPR014756 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 191 | 502 | 1.62E-64 | IPR011009 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 678 | 792 | 4.9E-6 | IPR013783 |
| Gene3D | G3DSA:2.60.120.200 | - | 2 | 127 | 1.9E-31 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1047 | 1143 | 9.1E-7 | IPR013783 |
| Gene3D | G3DSA:2.60.40.2810 | - | 1144 | 1237 | 1.8E-10 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 901 | 1041 | 1.0E-10 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 286 | 3.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 305 | 515 | 1.0E-49 | - |
| SMART | SM00220 | serkin_6 | 211 | 511 | 5.8E-21 | IPR000719 |
| ProSiteProfiles | PS50194 | Filamin/ABP280 repeat profile. | 753 | 788 | 9.958334 | IPR017868 |
| ProSiteProfiles | PS50194 | Filamin/ABP280 repeat profile. | 899 | 1034 | 10.574789 | IPR017868 |
| ProSiteProfiles | PS50194 | Filamin/ABP280 repeat profile. | 1105 | 1143 | 11.047404 | IPR017868 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 211 | 511 | 33.686283 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 217 | 241 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 351 | 363 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1588 | 1608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1582 | 1608 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49150.3 | - | 0 |
| RefSeq | XP_051187728.1 | protein GAMETE EXPRESSED 2 [Lolium perenne] | 0 |
| F4K4R6 | Protein GAMETE EXPRESSED 2 OS=Arabidopsis thaliana OX=3702 GN=GEX2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0Q3HA70 | Protein GAMETE EXPRESSED 2 OS=Brachypodium distachyon OX=15368 GN=BRADI_4g30665v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg28056, jg28058 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19054 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah012422 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59613, Sbi_jg63036 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23858 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025794 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl03321, Sgl03623, Sgl08394, Sgl08743 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000015254, gene:ENSEOMG00000029727 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0016650, CQ.Regalona.r1.3BG0017410 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30234120 |
| Apiaceae | Apium graveolens | 1 | Ag5G02409 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G012410 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710484 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2580.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G16829 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G49150.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10005444m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g19500.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g070140.2N, BniB04g005630.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1115 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1211 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g07490 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g24850 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12155 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1280 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00022641 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G38029, Lb0G38030, Lb0G38031 |
| Poaceae | Echinochloa crus-galli | 3 | AH03.1978, BH03.2425, CH03.2309 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0535730 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0482440.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_011719, gene-QYE76_017069 |
| Poaceae | Oryza coarctata | 2 | Oco17G005300, Oco18G005320 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g25650.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G187800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0705316 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr10G009610 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G362000 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC5AG035460, gene_TRIDC5AG035470 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G221000.2, TraesCS5B02G219800.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb099800_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20085 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32383 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.632, evm.TU.LG12.460, evm.TU.LG12.999 ... |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc01g19310, gene.Posoc01g32080, gene.Posoc07g05890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1454 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-20033, nbisL1-mrna-20034, nbisL1-mrna-20259 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13567 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-13395, nbisL1-mrna-13396, nbisL1-mrna-19089 ... |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.214 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00011901, Maker00012099 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9086 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12134 |
| Salicaceae | Populus euphratica | 1 | populus_peu22635 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132626771 |
| Solanaceae | Solanum chilense | 1 | SOLCI000635200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107015974 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_8526 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1661 |
| Zosteraceae | Zostera marina | 1 | Zosma01g40020.v3.1 |