Basic Information
Locus ID:
gene-QYE76_016898
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_620 | 28370 | 34190 | + | gene-QYE76_016898 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 111,065.63 Da | 54.31 | 76.09 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 606 | 656 | 5.2E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 426 | 481 | 5.2E-13 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 652 | 715 | 1.87E-12 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 918 | 1008 | 4.96E-6 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 754 | 812 | 1.59E-8 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 756 | 818 | 2.8E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 658 | 748 | 5.4E-14 | IPR013083 |
| SMART | SM00249 | PHD_3 | 672 | 712 | 1.7E-7 | IPR001965 |
| SMART | SM00249 | PHD_3 | 758 | 815 | 0.0012 | IPR001965 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 673 | 711 | - | IPR019786 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 759 | 814 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 76 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_051198158.1 | uncharacterized protein LOC127311733 isoform X2 [Lolium perenne] | 0 |
| TrEMBL | A0A8I7BHX6 | PHD-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology