Basic Information
Locus ID:
gene-QYE76_016725
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_527 | 77740 | 78448 | - | gene-QYE76_016725 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.10 | 23,900.39 Da | 90.42 | 62.15 | -1.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 139 | 168 | 2.6E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 139 | 176 | 2.43E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 174 | 1.2E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 144 | 168 | 9.966515 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 84 | - | - |
| Coils | Coil | Coil | 31 | 85 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051197738.1 | NAD-dependent protein deacetylase HST1-like [Lolium perenne] | 0 |
| TrEMBL | A0A3B6I046 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg55313 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg14352 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1AG0021820 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10009637m.g.v1.0 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0033s00012.v1.0 |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_016725, gene-QYE76_027791, gene-QYE76_027792 ... |
| Poaceae | Oryza coarctata | 1 | Oco12G002140 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g05200.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402251 |
| Poaceae | Thinopyrum elongatum | 5 | Tel3E01G225000, Tel3E01G226000, Tel3E01G226400 ... |
| Poaceae | Triticum aestivum | 15 | TraesCS3A02G309200.1.cds1, TraesCS3A02G309300.1.cds1 ... |