Basic Information
Locus ID:
gene-QYE76_016449
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unplaced_832 | 25664 | 30333 | - | gene-QYE76_016449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 85,832.26 Da | 56.93 | 67.34 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 425 | 461 | 6.4E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 312 | 344 | 1.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 466 | 503 | 1.6E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 600 | 637 | 0.011 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 306 | 643 | 2.85E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 256 | 415 | 1.1E-11 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 416 | 678 | 1.4E-48 | IPR015943 |
| SMART | SM00320 | WD40_4 | 597 | 638 | 0.0077 | IPR001680 |
| SMART | SM00320 | WD40_4 | 423 | 461 | 1.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 464 | 503 | 1.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 556 | 596 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 505 | 544 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 345 | 1.4E-7 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 313 | 354 | 14.318126 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 470 | 505 | 12.580379 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 430 | 462 | 11.075592 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 313 | 349 | 11.471045 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 430 | 470 | 14.518635 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 470 | 505 | 10.469233 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 448 | 462 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 332 | 346 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 448 | 462 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 490 | 504 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 332 | 346 | 1.0E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 729 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 167 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_047063468.1 | WD repeat-containing protein 44-like [Lolium rigidum] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | I1J3D8 | WD_REPEATS_REGION domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100841789 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology