HalophFGD

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Basic Information
Locus ID: gene-QYE76_016198
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 258921296 258922843 - gene-QYE76_016198
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.19 59,369.87 Da 67.17 95.22 -0.26
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 11 98 1.96E-8 IPR036047
SUPERFAMILY SSF52047 RNI-like 196 387 9.81E-8 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 134 464 3.8E-10 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G29830.2 - 0
RefSeq XP_047044121.1 uncharacterized protein LOC124648386 [Lolium rigidum] 0
Swiss-Prot Q9LJ48 Putative F-box protein At3g29830 OS=Arabidopsis thaliana OX=3702 GN=At3g29830 PE=4 SV=1 0
TrEMBL A0A3B6A189 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH05.354, AH09.721, CH09.786
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_4AG0319250, gene-QOZ80_4BG0356840 ...
gene-QOZ80_5AG0364960, gene-QOZ80_5AG0383920
Poaceae Hordeum vulgare 18 HORVU.MOREX.r3.1HG0007520.1.CDS1 ...
HORVU.MOREX.r3.1HG0016820.1.CDS1, HORVU.MOREX.r3.1HG0016850.1.CDS1, HORVU.MOREX.r3.1HG0045060.1.CDS1, HORVU.MOREX.r3.1HG0049590.1.CDS1, HORVU.MOREX.r3.1HG0080330.1.CDS1, HORVU.MOREX.r3.1HG0080370.1.CDS1, HORVU.MOREX.r3.2HG0130870.1.CDS1, HORVU.MOREX.r3.2HG0161210.1.CDS1, HORVU.MOREX.r3.2HG0184290.1.CDS1, HORVU.MOREX.r3.3HG0276200.1.CDS1, HORVU.MOREX.r3.3HG0276210.1.CDS1, HORVU.MOREX.r3.3HG0278360.1.CDS1, HORVU.MOREX.r3.3HG0314560.1.CDS1, HORVU.MOREX.r3.3HG0314650.1.CDS1, HORVU.MOREX.r3.6HG0626560.1.CDS1, HORVU.MOREX.r3.6HG0626610.1.CDS1, HORVU.MOREX.r3.7HG0664080.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_000820, gene-QYE76_007611, gene-QYE76_007688 ...
gene-QYE76_007689, gene-QYE76_007690, gene-QYE76_007691, gene-QYE76_010407, gene-QYE76_012370, gene-QYE76_014609, gene-QYE76_015959, gene-QYE76_016198, gene-QYE76_016277, gene-QYE76_020296, gene-QYE76_020297, gene-QYE76_020302, gene-QYE76_039853, gene-QYE76_039855, gene-QYE76_040150, gene-QYE76_045199
Poaceae Oryza coarctata 10 Oco07G003640, Oco08G003820, Oco09G015490, Oco09G015500 ...
Oco09G015560, Oco09G015570, Oco10G015370, Oco10G015430, Oco10G015440, Oco10G015450
Poaceae Oryza sativa 9 LOC_Os04g30750.1, LOC_Os04g30810.1, LOC_Os04g30830.1 ...
LOC_Os05g45990.1, LOC_Os05g46300.1, LOC_Os05g46310.1, LOC_Os05g46320.1, LOC_Os05g46380.1, LOC_Os05g46390.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G459900, gene-BS78_09G218700
Poaceae Puccinellia tenuiflora 10 Pt_Chr0102687, Pt_Chr0203147, Pt_Chr0306206, Pt_Chr0503882 ...
Pt_Chr0503884, Pt_Chr0504135, Pt_Chr0504136, Pt_Chr0704333, Pt_Chr0704335, Pt_Chr0704337
Poaceae Sporobolus alterniflorus 2 Chr01G024090, Chr23G014350
Poaceae Thinopyrum elongatum 11 Tel1E01G079600, Tel1E01G411000, Tel1E01G411400 ...
Tel1E01G587900, Tel1E01G588200, Tel2E01G293700, Tel2E01G363700, Tel2E01G501000, Tel2E01G876500, Tel3E01G733700, Tel6E01G664600
Poaceae Triticum dicoccoides 16 gene_TRIDC1AG052530, gene_TRIDC1BG013270 ...
gene_TRIDC1BG028500, gene_TRIDC1BG060110, gene_TRIDC1BG060150, gene_TRIDC1BG061020, gene_TRIDC2AG024320, gene_TRIDC2BG028840, gene_TRIDC2BG056200, gene_TRIDC3BG052080, gene_TRIDC6AG055430, gene_TRIDC6AG055460, gene_TRIDC6AG055470, gene_TRIDC6BG056010, gene_TRIDC6BG065020, gene_TRIDC6BG065070
Poaceae Triticum aestivum 43 TraesCS1A02G362200.1, TraesCS1A02G362300.1 ...
TraesCS1B02G046600.1.cds1, TraesCS1B02G047100.1.cds1, TraesCS1B02G094000.1.cds1, TraesCS1B02G172200.1, TraesCS1B02G259100.1.cds1, TraesCS1B02G373300.1.cds1, TraesCS1B02G373700.1.cds1, TraesCS1B02G379500.1.cds1, TraesCS1B02G408100.1.cds1, TraesCS1D02G042600.1.cds1, TraesCS1D02G153800.1.cds1, TraesCS1D02G247900.1.cds1, TraesCS1D02G361100.1.cds1, TraesCS1D02G361200.1.cds1, TraesCS1D02G367200.1.cds1, TraesCS2A02G189800.1.cds1, TraesCS2A02G279400.1.cds1, TraesCS2A02G368800.1.cds1, TraesCS2A02G516400.1.cds1, TraesCS2B02G297400.1.cds1, TraesCS2B02G386000.1.cds1, TraesCS2D02G278400.1.cds1, TraesCS2D02G365500.1.cds1, TraesCS3A02G243500.1, TraesCS3B02G346800.1.cds1, TraesCS3B02G505200.1.cds1, TraesCS3D02G243400.1.cds1, TraesCS3D02G311200.1, TraesCS3D02G455900.1.cds1, TraesCS4B02G086800.1.cds1, TraesCS4D02G096900.1.cds1, TraesCS5B02G207400.1.cds1, TraesCS6A02G371900.1.cds1, TraesCS6B02G308700.1.cds1, TraesCS6B02G409300.1.cds1, TraesCS6B02G409600.1.cds1, TraesCS6D02G132700.1.cds1, TraesCS6D02G298600.1.cds1, TraesCS6D02G300500.1.cds1, TraesCS6D02G355700.1.cds1, TraesCS7D02G293700.1.cds1
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