Basic Information
Locus ID:
gene-QYE76_015740
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 245402302 | 245402694 | + | gene-QYE76_015740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 11,757.36 Da | 32.64 | 73.79 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 22 | 92 | 7.9E-15 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 21 | 88 | 9.54E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 100 | 1.3E-21 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 25 | 87 | 3.0E-12 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 21 | 94 | 14.756393 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54790.2 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_047079621.1 | uncharacterized protein LOC124690258 [Lolium rigidum] | 0 |
| Q8GWV5 | U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2 | 0 | |
| TrEMBL | M7ZBR2 | U-box domain-containing protein 3 OS=Triticum urartu OX=4572 GN=TRIUR3_32030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0091s00022.v1.0 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0352790.1, HORVU.MOREX.r3.6HG0592860.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_015740 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g13780.1 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG069030 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G370800.1 |
| Salicaceae | Populus euphratica | 1 | populus_peu04394 |