Basic Information
Locus ID:
gene-QYE76_015722
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 245032269 | 245043546 | + | gene-QYE76_015722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 88,527.61 Da | 65.00 | 56.46 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00847 | AP2 domain | 9 | 52 | 6.1E-5 | IPR001471 |
| SUPERFAMILY | SSF54171 | DNA-binding domain | 10 | 65 | 1.24E-12 | IPR016177 |
| Gene3D | G3DSA:3.30.730.10 | AP2/ERF domain | 10 | 67 | 3.1E-15 | IPR036955 |
| SMART | SM00380 | rav1_2 | 10 | 71 | 1.2E-13 | IPR001471 |
| ProSiteProfiles | PS51032 | AP2/ERF domain profile. | 10 | 65 | 17.292828 | IPR001471 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 785 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 130 | - | - |
| Coils | Coil | Coil | 256 | 286 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G43160.1 | related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. | 0 |
| RefSeq | XP_051221053.1 | uncharacterized protein LOC127339216 [Lolium perenne] | 0 |
| Q7G1L2 | Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2 | 0 | |
| TrEMBL | M8BFX2 | Putative cysteine-rich receptor-like protein kinase 39 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 30 | gene-QYE76_001210, gene-QYE76_002996, gene-QYE76_004554 ... |