HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QYE76_015592
Species & Taxonomic ID: Lolium multiflorum & 4521
Genome Assembly: GCA_030979885.1
Description: F-box domain containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 241063372 241064796 + gene-QYE76_015592
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.71 51,915.29 Da 41.26 86.25 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 92 115 7.2E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 88 141 2.49E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051187478.1 uncharacterized protein LOC127301305 [Lolium perenne] 0
TrEMBL B8AJC1 F-box domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07584 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_2BG0188920
Poaceae Lolium multiflorum 7 gene-QYE76_005018, gene-QYE76_005021, gene-QYE76_015592 ...
gene-QYE76_016468, gene-QYE76_016471, gene-QYE76_060466, gene-QYE76_060468
Poaceae Oryza sativa 1 LOC_Os02g33840.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G355100, gene-BS78_10G247500
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.