Basic Information
Locus ID:
gene-QYE76_015432
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
FAR1 DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 236095625 | 236101276 | + | gene-QYE76_015432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 101,745.01 Da | 47.08 | 77.36 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 167 | 256 | 5.0E-15 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 380 | 474 | 3.7E-27 | IPR018289 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 786 | 873 | 2.35E-7 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 785 | 879 | 2.7E-6 | IPR015300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 37 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G15090.1 | FRS (FAR1 Related Sequences) transcription factor family. Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. | 0 |
| RefSeq | XP_051190431.1 | uncharacterized protein LOC127303766 [Lolium perenne] | 0 |
| Q9SWG3 | Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7V110 | Protein FAR1-RELATED SEQUENCE OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14179 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108710.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 32 | gene-QYE76_000433, gene-QYE76_009952, gene-QYE76_009956 ... |