Basic Information
Locus ID:
gene-QYE76_015203
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 228975594 | 228984632 | + | gene-QYE76_015203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 168,811.55 Da | 47.54 | 85.04 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 728 | 825 | 2.15319E-12 | - |
| CDD | cd09274 | RNase_HI_RT_Ty3 | 1167 | 1274 | 1.68016E-49 | - |
| Pfam | PF17917 | RNase H-like domain found in reverse transcriptase | 1166 | 1253 | 3.6E-27 | IPR041373 |
| Pfam | PF03732 | Retrotransposon gag protein | 428 | 518 | 4.2E-9 | IPR005162 |
| SUPERFAMILY | SSF50630 | Acid proteases | 725 | 833 | 5.63E-5 | IPR021109 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 995 | 1265 | 2.31E-40 | IPR043502 |
| Gene3D | G3DSA:3.10.20.370 | - | 1163 | 1224 | 7.9E-6 | - |
| Gene3D | G3DSA:3.10.10.10 | HIV Type 1 Reverse Transcriptase, subunit A, domain 1 | 986 | 1135 | 2.9E-22 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 709 | 847 | 1.1E-17 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| Coils | Coil | Coil | 1361 | 1381 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039682991.1 | uncharacterized protein LOC120576082 [Medicago truncatula] | 0 |
| Q8I7P9 | Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 | 0 | |
| TrEMBL | A0A2G9HYA0 | RNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04802 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 258 | gene-QYE76_000048, gene-QYE76_001332, gene-QYE76_001432 ... |