Basic Information
Locus ID:
gene-QYE76_015191
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 228523404 | 228523925 | + | gene-QYE76_015191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 18,510.87 Da | 47.56 | 92.66 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 100 | 162 | 8.0054E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 22 | 83 | 3.0E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 99 | 161 | 2.3E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 10 | 163 | 1.2E-37 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 13 | 93 | 1.5E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 94 | 167 | 3.9E-23 | - |
| SMART | SM00054 | efh_1 | 59 | 87 | 1.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 23 | 51 | 0.33 | IPR002048 |
| SMART | SM00054 | efh_1 | 100 | 128 | 2.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 136 | 164 | 6.0E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 55 | 90 | 10.245409 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 96 | 131 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 19 | 54 | 12.170192 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 132 | 167 | 12.979158 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 68 | 80 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 109 | 121 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 145 | 157 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 32 | 44 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_051184913.1 | probable calcium-binding protein CML14 [Lolium perenne] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6W8H9 | Calcium-binding protein CML15 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology