Basic Information
Locus ID:
gene-QYE76_015178
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 228195250 | 228200132 | - | gene-QYE76_015178 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 94,355.68 Da | 42.49 | 84.22 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 542 | 675 | 1.4039E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 697 | 739 | 8.4E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 544 | 674 | 1.3E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 503 | 742 | 1.33E-59 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 502 | 765 | 1.7E-96 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 676 | 760 | 1.7E-96 | - |
| SMART | SM00382 | AAA_5 | 540 | 677 | 1.6E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 647 | 666 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 233 | - | - |
| Coils | Coil | Coil | 729 | 753 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_051210558.1 | uncharacterized protein LOC127327805 [Lolium perenne] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | I1HG30 | AAA domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100827769 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology