Basic Information
Locus ID:
gene-QYE76_015177
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 228140933 | 228146087 | - | gene-QYE76_015177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 94,020.23 Da | 45.71 | 86.56 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 533 | 666 | 1.77716E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 535 | 665 | 8.9E-39 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 688 | 724 | 3.6E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 492 | 728 | 2.78E-59 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 667 | 744 | 1.6E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 493 | 666 | 1.6E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 531 | 668 | 1.2E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 638 | 657 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 787 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 732 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 472 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_047094611.1 | uncharacterized protein LOC124706990 [Lolium rigidum] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | F2E0B5 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology