Basic Information
Locus ID:
gene-QYE76_015129
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 226810037 | 226812016 | + | gene-QYE76_015129 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 26,319.05 Da | 68.48 | 77.38 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 177 | 222 | 2.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 177 | 226 | 3.53E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 163 | 236 | 8.6E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 177 | 222 | 0.0024 | IPR011016 |
| SMART | SM01197 | FANCL_C_2 | 174 | 230 | 0.0022 | - |
| SMART | SM00184 | ring_2 | 178 | 221 | 2.1E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 178 | 222 | 13.005633 | IPR001841 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27940.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_051221928.1 | E3 ubiquitin-protein ligase Os03g0188200-like [Lolium perenne] | 0 |
| Q9SJJ7 | RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6WZR0 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_015129, gene-QYE76_015248 |