Basic Information
Locus ID:
gene-QYE76_015102
Species & Taxonomic ID:
Lolium multiflorum & 4521
Genome Assembly:
GCA_030979885.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 226063969 | 226071982 | - | gene-QYE76_015102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 147,776.89 Da | 39.29 | 106.60 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 14 | 90 | 1.8E-19 | IPR041118 |
| Pfam | PF00560 | Leucine Rich Repeat | 758 | 780 | 0.26 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 856 | 878 | 0.34 | IPR001611 |
| Pfam | PF00931 | NB-ARC domain | 174 | 416 | 9.6E-38 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 743 | 1095 | 2.11E-30 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1113 | 1297 | 8.84E-22 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 492 | 831 | 2.21E-51 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 162 | 430 | 2.97E-52 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 13 | 117 | 2.1E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 840 | 935 | 9.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1114 | 1313 | 1.1E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 416 | 504 | 2.1E-10 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 940 | 1091 | 4.8E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 415 | 3.0E-5 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 531 | 839 | 1.6E-61 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 157 | 322 | 1.1E-32 | IPR027417 |
| SMART | SM00369 | LRR_typ_2 | 731 | 756 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 854 | 878 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 681 | 705 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 804 | 827 | 7.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1159 | 1182 | 120.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 856 | 878 | 7.43473 | IPR001611 |
| PRINTS | PR00364 | Disease resistance protein signature | 655 | 671 | 9.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 364 | 378 | 9.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 267 | 281 | 9.4E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 194 | 209 | 9.4E-18 | - |
| Coils | Coil | Coil | 38 | 58 | - | - |
| Coils | Coil | Coil | 119 | 146 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_047053245.1 | putative disease resistance protein RGA4 [Lolium rigidum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5Z592 | Disease resistance protein RGA3 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology